3D structure

PDB id
6CZR (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of amicetin bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
GGAG*UGAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
Double sheared
Broad Annotation
Double sheared
Motif group
IL_09705.14
Basepair signature
cWW-tSH-tHS-cWW
Number of instances in this motif group
36

Unit IDs

6CZR|1|1a|G|1399
6CZR|1|1a|G|1400
6CZR|1|1a|A|1401
6CZR|1|1a|G|1402
*
6CZR|1|1a|U|1459
6CZR|1|1a|G|1460
6CZR|1|1a|A|1461
6CZR|1|1a|C|1462

Current chains

Chain 1a
16S Ribosomal RNA

Nearby chains

Chain 1A
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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