IL_6CZR_179
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- UGAGUAG*CGAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CZR_179 not in the Motif Atlas
- Homologous match to IL_7RQB_007
- Geometric discrepancy: 0.119
- The information below is about IL_7RQB_007
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
6CZR|1|2A|U|227
6CZR|1|2A|G|228
6CZR|1|2A|A|229
6CZR|1|2A|G|230
6CZR|1|2A|U|231
6CZR|1|2A|A|232
6CZR|1|2A|G|233
*
6CZR|1|2A|C|241
6CZR|1|2A|G|242
6CZR|1|2A|A|243
6CZR|1|2A|A|244
6CZR|1|2A|A|245
6CZR|1|2A|G|246
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 28
- 50S ribosomal protein L35
- Chain 2P
- 50S ribosomal protein L15
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