IL_6CZR_188

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CCGAAAC*GAGAUAGCUG

Length

17 nucleotides

Bulged bases

6CZR|1|2A|G|847, 6CZR|1|2A|G|851

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CZR|1|2A|C|718
6CZR|1|2A|C|719
6CZR|1|2A|G|720
6CZR|1|2A|A|721
6CZR|1|2A|A|722
6CZR|1|2A|A|723
6CZR|1|2A|C|724
*
6CZR|1|2A|G|845
6CZR|1|2A|A|846
6CZR|1|2A|G|847
6CZR|1|2A|A|848
6CZR|1|2A|U|849
6CZR|1|2A|A|850
6CZR|1|2A|G|851
6CZR|1|2A|C|852
6CZR|1|2A|U|853
6CZR|1|2A|G|854

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15