IL_6CZR_212

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GGA*UUUAAAGAGUGCGUAAUAGCUCAC

Length

27 nucleotides

Bulged bases

6CZR|1|2A|U|1128, 6CZR|1|2A|A|1133, 6CZR|1|2A|A|1140

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CZR|1|2A|G|1100
6CZR|1|2A|G|1101
6CZR|1|2A|A|1102
*
6CZR|1|2A|U|1126
6CZR|1|2A|U|1127
6CZR|1|2A|U|1128
6CZR|1|2A|A|1129
6CZR|1|2A|A|1130
6CZR|1|2A|A|1131
6CZR|1|2A|G|1132
6CZR|1|2A|A|1133
6CZR|1|2A|G|1134
6CZR|1|2A|U|1135
6CZR|1|2A|G|1136
6CZR|1|2A|C|1137
6CZR|1|2A|G|1138
6CZR|1|2A|U|1139
6CZR|1|2A|A|1140
6CZR|1|2A|A|1141
6CZR|1|2A|U|1142
6CZR|1|2A|A|1143
6CZR|1|2A|G|1144
6CZR|1|2A|C|1145
6CZR|1|2A|U|1146
6CZR|1|2A|C|1147
6CZR|1|2A|A|1148
6CZR|1|2A|C|1149

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L36

Chain 2H

50S ribosomal protein L6

Chain 2Q

50S ribosomal protein L16