3D structure

PDB id
6CZR (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of amicetin bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
GGAGUACG*UGAAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_41756.2
Basepair signature
cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
Number of instances in this motif group
5

Unit IDs

6CZR|1|1a|G|865
6CZR|1|1a|G|866
6CZR|1|1a|A|867
6CZR|1|1a|G|868
6CZR|1|1a|U|869
6CZR|1|1a|A|870
6CZR|1|1a|C|871
6CZR|1|1a|G|872
*
6CZR|1|1a|U|883
6CZR|1|1a|G|884
6CZR|1|1a|A|885
6CZR|1|1a|A|886
6CZR|1|1a|A|887
6CZR|1|1a|C|888

Current chains

Chain 1a
16S Ribosomal RNA

Nearby chains

Chain 1l
30S ribosomal protein S12
Chain 1q
30S ribosomal protein S17

Coloring options:

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