IL_6CZR_377

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

6CZR|1|2A|G|1605

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6CZR_377 not in the Motif Atlas

Homologous match to IL_9DFE_055

Geometric discrepancy: 0.2242

The information below is about IL_9DFE_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

6CZR|1|2A|U|1478
6CZR|1|2A|A|1479
6CZR|1|2A|G|1480
*
6CZR|1|2A|C|1603
6CZR|1|2A|A|1604
6CZR|1|2A|G|1605
6CZR|1|2A|G|1606

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains