IL_6DDD_047

3D structure

PDB id

6DDD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCGUAUC*GAUAG

Length

12 nucleotides

Bulged bases

6DDD|1|1|U|1629

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DDD|1|1|U|1451
6DDD|1|1|C|1452
6DDD|1|1|G|1453
6DDD|1|1|U|1454
6DDD|1|1|A|1459
6DDD|1|1|U|1460
6DDD|1|1|C|1461
*
6DDD|1|1|G|1627
6DDD|1|1|A|1628
6DDD|1|1|U|1629
6DDD|1|1|A|1630
6DDD|1|1|G|1631

Current chains

Chain 1

23S rRNA

Nearby chains