IL_6DDG_047

3D structure

PDB id

6DDG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-6

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAUCGUAU*AUAGAAAA

Length

17 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DDG|1|1|U|1448
6DDG|1|1|A|1449
6DDG|1|1|A|1450
6DDG|1|1|U|1451
6DDG|1|1|C|1452
6DDG|1|1|G|1453
6DDG|1|1|U|1454
6DDG|1|1|A|1459
6DDG|1|1|U|1460
*
6DDG|1|1|A|1628
6DDG|1|1|U|1629
6DDG|1|1|A|1630
6DDG|1|1|G|1631
6DDG|1|1|A|1632
6DDG|1|1|A|1633
6DDG|1|1|A|1634
6DDG|1|1|A|1635

Current chains

Chain 1

23S rRNA

Nearby chains