IL_6DVK_003
3D structure
- PDB id
- 6DVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Computationally designed mini tetraloop-tetraloop receptor by the RNAMake program - construct 6 (miniTTR 6)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GAACUAC*GC
- Length
- 9 nucleotides
- Bulged bases
- 6DVK|1|H|A|33
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88017.1
- Basepair signature
- cWW-L-cWW-L-L-R-L
- Number of instances in this motif group
- 7
Unit IDs
6DVK|1|H|G|28
6DVK|1|H|A|29
6DVK|1|H|A|30
6DVK|1|H|C|31
6DVK|1|H|U|32
6DVK|1|H|A|33
6DVK|1|H|C|34
*
6DVK|1|H|G|61
6DVK|1|H|C|62
Current chains
- Chain H
- RNA (95-MER)
Nearby chains
No other chains within 10ÅColoring options: