IL_6DVK_004
3D structure
- PDB id
- 6DVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Computationally designed mini tetraloop-tetraloop receptor by the RNAMake program - construct 6 (miniTTR 6)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GAACAG*CUACCC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6DVK|1|H|G|38
6DVK|1|H|A|39
6DVK|1|H|A|40
6DVK|1|H|C|41
6DVK|1|H|A|42
6DVK|1|H|G|43
*
6DVK|1|H|C|52
6DVK|1|H|U|53
6DVK|1|H|A|54
6DVK|1|H|C|55
6DVK|1|H|C|56
6DVK|1|H|C|57
Current chains
- Chain H
- RNA (95-MER)
Nearby chains
No other chains within 10ÅColoring options: