IL_6DZI_125
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- CUUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 6DZI|1|h|U|52, 6DZI|1|h|A|54, 6DZI|1|h|A|55
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DZI_125 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.1446
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
6DZI|1|h|C|51
6DZI|1|h|U|52
6DZI|1|h|U|53
6DZI|1|h|A|54
6DZI|1|h|A|55
6DZI|1|h|C|56
*
6DZI|1|h|G|359
6DZI|1|h|G|360
6DZI|1|h|G|361
Current chains
- Chain h
- 16S rRNA
Nearby chains
- Chain u
- 30S ribosomal protein S12
Coloring options: