IL_6DZI_160

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6DZI_160 not in the Motif Atlas

Homologous match to IL_6CZR_150

Geometric discrepancy: 0.2726

The information below is about IL_6CZR_150

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|h|G|935
6DZI|1|h|G|936
*
6DZI|1|h|C|1207
6DZI|1|h|A|1208
6DZI|1|h|C|1209

Current chains

Chain h

16S rRNA

Nearby chains

Chain 6

30S ribosomal protein S19

Chain Y

Ribosome hibernation promoting factor

Chain v

30S ribosomal protein S13