IL_6DZK_010
3D structure
- PDB id
- 6DZK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DZK_010 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.1312
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60988.3
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
6DZK|1|A|C|129
6DZK|1|A|U|130
6DZK|1|A|G|131
6DZK|1|A|C|132
6DZK|1|A|C|133
*
6DZK|1|A|G|227
6DZK|1|A|A|228
6DZK|1|A|U|229
6DZK|1|A|G|230
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
- Chain Q
- 30S ribosomal protein S17
- Chain T
- 30S ribosomal protein S20
Coloring options: