IL_6DZK_051

3D structure

PDB id

6DZK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAUGC*GUGGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZK|1|A|C|1240
6DZK|1|A|G|1241
6DZK|1|A|A|1242
6DZK|1|A|U|1243
6DZK|1|A|G|1244
6DZK|1|A|C|1245
*
6DZK|1|A|G|1252
6DZK|1|A|U|1253
6DZK|1|A|G|1254
6DZK|1|A|G|1255
6DZK|1|A|A|1256
6DZK|1|A|G|1257

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14

Chain S

30S ribosomal protein S19