IL_6DZP_008

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

GUGAGAAAAU*GUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|G|356
6DZP|1|A|U|357
6DZP|1|A|G|358
6DZP|1|A|A|359
6DZP|1|A|G|360
6DZP|1|A|A|361
6DZP|1|A|A|362
6DZP|1|A|A|363
6DZP|1|A|A|364
6DZP|1|A|U|365
*
6DZP|1|A|G|437
6DZP|1|A|U|438
6DZP|1|A|C|439

Current chains

Chain A

23S rRNA

Nearby chains