IL_6DZP_056

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

GGUACUAAC*GGACCUUC

Length

17 nucleotides

Bulged bases

6DZP|1|A|U|1551, 6DZP|1|A|C|1553

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|G|1549
6DZP|1|A|G|1550
6DZP|1|A|U|1551
6DZP|1|A|A|1552
6DZP|1|A|C|1553
6DZP|1|A|U|1554
6DZP|1|A|A|1555
6DZP|1|A|A|1556
6DZP|1|A|C|1557
*
6DZP|1|A|G|1614
6DZP|1|A|G|1615
6DZP|1|A|A|1616
6DZP|1|A|C|1617
6DZP|1|A|C|1618
6DZP|1|A|U|1619
6DZP|1|A|U|1620
6DZP|1|A|C|1621

Current chains

Chain A

23S rRNA

Nearby chains