IL_6DZP_146

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

GUGUAGGAUAGGU*ACUC

Length

17 nucleotides

Bulged bases

6DZP|1|A|U|2334, 6DZP|1|A|U|2341, 6DZP|1|A|G|2343

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|G|2333
6DZP|1|A|U|2334
6DZP|1|A|G|2335
6DZP|1|A|U|2336
6DZP|1|A|A|2337
6DZP|1|A|G|2338
6DZP|1|A|G|2339
6DZP|1|A|A|2340
6DZP|1|A|U|2341
6DZP|1|A|A|2342
6DZP|1|A|G|2343
6DZP|1|A|G|2344
6DZP|1|A|U|2345
*
6DZP|1|A|A|2399
6DZP|1|A|C|2400
6DZP|1|A|U|2401
6DZP|1|A|C|2402

Current chains

Chain A

23S rRNA

Nearby chains