IL_6EM1_047
3D structure
- PDB id
- 6EM1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGUCAAG*CGACAUU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6EM1|1|1|A|2833
6EM1|1|1|G|2834
6EM1|1|1|U|2835
6EM1|1|1|C|2836
6EM1|1|1|A|2837
6EM1|1|1|A|2838
6EM1|1|1|G|2839
*
6EM1|1|1|C|2849
6EM1|1|1|G|2850
6EM1|1|1|A|2851
6EM1|1|1|C|2852
6EM1|1|1|A|2853
6EM1|1|1|U|2854
6EM1|1|1|U|2855
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain b
- Nucleolar GTP-binding protein 1
- Chain r
- Ribosome biogenesis protein NSA2
Coloring options: