IL_6EM1_079
3D structure
- PDB id
- 6EM1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUCGUAU*AAGAG
- Length
- 12 nucleotides
- Bulged bases
- 6EM1|1|1|A|980, 6EM1|1|1|A|1103, 6EM1|1|1|G|1104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6EM1|1|1|C|975
6EM1|1|1|U|976
6EM1|1|1|C|977
6EM1|1|1|G|978
6EM1|1|1|U|979
6EM1|1|1|A|980
6EM1|1|1|U|981
*
6EM1|1|1|A|1102
6EM1|1|1|A|1103
6EM1|1|1|G|1104
6EM1|1|1|A|1105
6EM1|1|1|G|1106
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain Q
- 60S ribosomal protein L18-A
Coloring options: