IL_6ENJ_087
3D structure
- PDB id
- 6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUGAC*GUUG
- Length
- 9 nucleotides
- Bulged bases
- 6ENJ|1|A|U|2203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ENJ_087 not in the Motif Atlas
- Homologous match to IL_4WF9_085
- Geometric discrepancy: 0.3436
- The information below is about IL_4WF9_085
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67743.1
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 9
Unit IDs
6ENJ|1|A|U|2202
6ENJ|1|A|U|2203
6ENJ|1|A|G|2204
6ENJ|1|A|A|2205
6ENJ|1|A|C|2206
*
6ENJ|1|A|G|2218
6ENJ|1|A|U|2219
6ENJ|1|A|U|2220
6ENJ|1|A|G|2221
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain X
- 50S ribosomal protein L28
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