IL_6ENJ_112
3D structure
- PDB id
- 6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCU*AGAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ENJ_112 not in the Motif Atlas
- Geometric match to IL_6DME_002
- Geometric discrepancy: 0.3517
- The information below is about IL_6DME_002
- Detailed Annotation
- 8-nt loop receptor
- Broad Annotation
- Loop-receptor motif
- Motif group
- IL_70784.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
6ENJ|1|B|C|30
6ENJ|1|B|C|31
6ENJ|1|B|U|32
*
6ENJ|1|B|A|50
6ENJ|1|B|G|51
6ENJ|1|B|A|52
6ENJ|1|B|A|53
6ENJ|1|B|G|54
Current chains
- Chain B
- 5S Ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
Coloring options: