3D structure

PDB id
6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CGAGGC*GCGUAG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ENJ_183 not in the Motif Atlas
Geometric match to IL_3LQX_002
Geometric discrepancy: 0.2572
The information below is about IL_3LQX_002
Detailed Annotation
tSH-tHW-tHS-cWW
Broad Annotation
No text annotation
Motif group
IL_35186.2
Basepair signature
cWW-tSH-tHW-L-R-cWW-cWW
Number of instances in this motif group
6

Unit IDs

6ENJ|1|A|C|1357
6ENJ|1|A|G|1358
6ENJ|1|A|A|1359
6ENJ|1|A|G|1360
6ENJ|1|A|G|1361
6ENJ|1|A|C|1362
*
6ENJ|1|A|G|1369
6ENJ|1|A|C|1370
6ENJ|1|A|G|1371
6ENJ|1|A|U|1372
6ENJ|1|A|A|1373
6ENJ|1|A|G|1374

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L34
Chain C
50S ribosomal protein L2
Chain X
50S ribosomal protein L28

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