3D structure

PDB id
6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
AGAAUUC*GAGGAAU
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ENJ_209 not in the Motif Atlas
Homologous match to IL_6CZR_363
Geometric discrepancy: 0.1408
The information below is about IL_6CZR_363
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ENJ|1|a|A|673
6ENJ|1|a|G|674
6ENJ|1|a|A|675
6ENJ|1|a|A|676
6ENJ|1|a|U|677
6ENJ|1|a|U|678
6ENJ|1|a|C|679
*
6ENJ|1|a|G|711
6ENJ|1|a|A|712
6ENJ|1|a|G|713
6ENJ|1|a|G|714
6ENJ|1|a|A|715
6ENJ|1|a|A|716
6ENJ|1|a|U|717

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain f
30S ribosomal protein S6
Chain k
30S ribosomal protein S11
Chain r
30S ribosomal protein S18
Chain u
30S ribosomal protein S21

Coloring options:


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