IL_6ENJ_218

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

6ENJ|1|A|U|846, 6ENJ|1|A|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENJ_218 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.353

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

6ENJ|1|A|A|844
6ENJ|1|A|A|845
6ENJ|1|A|U|846
6ENJ|1|A|U|847
6ENJ|1|A|C|848
*
6ENJ|1|A|G|930
6ENJ|1|A|U|931
6ENJ|1|A|U|932
6ENJ|1|A|A|933
6ENJ|1|A|U|934

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30