IL_6ENJ_230

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAGGAAGGG*CAUUGACGUUAC

Length

22 nucleotides

Bulged bases

6ENJ|1|a|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ENJ|1|a|G|446
6ENJ|1|a|G|447
6ENJ|1|a|A|448
6ENJ|1|a|G|449
6ENJ|1|a|G|450
6ENJ|1|a|A|451
6ENJ|1|a|A|452
6ENJ|1|a|G|453
6ENJ|1|a|G|454
6ENJ|1|a|G|455
*
6ENJ|1|a|C|477
6ENJ|1|a|A|478
6ENJ|1|a|U|479
6ENJ|1|a|U|480
6ENJ|1|a|G|481
6ENJ|1|a|A|482
6ENJ|1|a|C|483
6ENJ|1|a|G|484
6ENJ|1|a|U|485
6ENJ|1|a|U|486
6ENJ|1|a|A|487
6ENJ|1|a|C|488

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16