IL_6FAI_035

3D structure

PDB id

6FAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FAI|1|2|G|652
6FAI|1|2|C|653
6FAI|1|2|C|654
6FAI|1|2|G|655
6FAI|1|2|G|656
6FAI|1|2|U|657
6FAI|1|2|C|658
*
6FAI|1|2|G|676
6FAI|1|2|G|677
6FAI|1|2|A|678
6FAI|1|2|U|679
6FAI|1|2|U|680
6FAI|1|2|U|681
6FAI|1|2|C|682

Current chains

Chain 2

20S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4-A