IL_6FAI_077

3D structure

PDB id

6FAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCCCG*CGUAACAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FAI|1|2|C|1637
6FAI|1|2|G|1638
6FAI|1|2|C|1639
6FAI|1|2|C|1640
6FAI|1|2|C|1641
6FAI|1|2|G|1642
*
6FAI|1|2|C|1759
6FAI|1|2|G|1760
6FAI|1|2|U|1761
6FAI|1|2|A|1762
6FAI|1|2|A|1763
6FAI|1|2|C|1764
6FAI|1|2|A|1765
6FAI|1|2|A|1766
6FAI|1|2|G|1767

Current chains

Chain 2

20S ribosomal RNA

Nearby chains

Chain X

40S ribosomal protein S23-A

Chain l

Serine/threonine-protein kinase RIO2