IL_6FKR_084

3D structure

PDB id

6FKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the dolphin proline-rich antimicrobial peptide Tur1A bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCUGUGAAC*GGGAGG

Length

15 nucleotides

Bulged bases

6FKR|1|1A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FKR|1|1A|C|2128
6FKR|1|1A|C|2129
6FKR|1|1A|U|2130
6FKR|1|1A|G|2131
6FKR|1|1A|U|2132
6FKR|1|1A|G|2133
6FKR|1|1A|A|2134
6FKR|1|1A|A|2135
6FKR|1|1A|C|2136
*
6FKR|1|1A|G|2155
6FKR|1|1A|G|2156
6FKR|1|1A|G|2157
6FKR|1|1A|A|2158
6FKR|1|1A|G|2159
6FKR|1|1A|G|2160

Current chains

Chain 1A

23S ribosomal RNA

Nearby chains