IL_6FT6_042
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUCAUCAG*CUCAAGC
- Length
- 16 nucleotides
- Bulged bases
- 6FT6|1|1|U|1191, 6FT6|1|1|C|1192, 6FT6|1|1|C|1316, 6FT6|1|1|A|1318
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FT6|1|1|G|1186
6FT6|1|1|C|1187
6FT6|1|1|U|1188
6FT6|1|1|C|1189
6FT6|1|1|A|1190
6FT6|1|1|U|1191
6FT6|1|1|C|1192
6FT6|1|1|A|1193
6FT6|1|1|G|1194
*
6FT6|1|1|C|1314
6FT6|1|1|U|1315
6FT6|1|1|C|1316
6FT6|1|1|A|1317
6FT6|1|1|A|1318
6FT6|1|1|G|1319
6FT6|1|1|C|1320
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L9-A
- Chain M
- 60S ribosomal protein L14-A
- Chain O
- 60S ribosomal protein L16-A
- Chain S
- 60S ribosomal protein L20-A
- Chain r
- Ribosome biogenesis protein NSA2
- Chain s
- Nuclear GTP-binding protein NUG1
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