IL_6FT6_089

3D structure

PDB id

6FT6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUCU*AGUGAG

Length

10 nucleotides

Bulged bases

6FT6|1|1|G|2945, 6FT6|1|1|A|2946

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FT6|1|1|C|2879
6FT6|1|1|U|2880
6FT6|1|1|C|2881
6FT6|1|1|U|2882
*
6FT6|1|1|A|2940
6FT6|1|1|G|2943
6FT6|1|1|U|2944
6FT6|1|1|G|2945
6FT6|1|1|A|2946
6FT6|1|1|G|2947

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain V

60S ribosomal protein L23-A

Chain b

Nucleolar GTP-binding protein 1