IL_6FT6_137
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UGAAU*AGGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FT6_137 not in the Motif Atlas
- Geometric match to IL_8P9A_295
- Geometric discrepancy: 0.1544
- The information below is about IL_8P9A_295
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
6FT6|1|1|U|1645
6FT6|1|1|G|1646
6FT6|1|1|A|1647
6FT6|1|1|A|1648
6FT6|1|1|U|1649
*
6FT6|1|1|A|1806
6FT6|1|1|G|1807
6FT6|1|1|G|1808
6FT6|1|1|A|1809
6FT6|1|1|A|1810
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain Z
- 60S ribosomal protein L27-A
- Chain g
- 60S ribosomal protein L34-A
- Chain n
- Pescadillo homolog
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