IL_6FTI_001

3D structure

PDB id

6FTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UCU*AAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6FTI_001 not in the Motif Atlas

Homologous match to IL_5EL4_357

Geometric discrepancy: 0.1311

The information below is about IL_5EL4_357

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTI|1|q|U|2
6FTI|1|q|C|3
6FTI|1|q|U|4
*
6FTI|1|q|A|69
6FTI|1|q|A|70
6FTI|1|q|A|71

Current chains

Chain q

p-Site tRNA

Nearby chains

Chain I

Ribosomal protein L10 (Predicted)

Chain u

Large subunit ribosomal RNA; LSU rRNA