IL_6FTI_039

3D structure

PDB id

6FTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GAAGGUGGCU*AGUGUUACAGC

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTI|1|u|G|745
6FTI|1|u|A|746
6FTI|1|u|A|747
6FTI|1|u|G|748
6FTI|1|u|G|749
6FTI|1|u|U|750
6FTI|1|u|G|751
6FTI|1|u|G|752
6FTI|1|u|C|753
6FTI|1|u|U|754
*
6FTI|1|u|A|909
6FTI|1|u|G|910
6FTI|1|u|U|911
6FTI|1|u|G|912
6FTI|1|u|U|913
6FTI|1|u|U|914
6FTI|1|u|A|915
6FTI|1|u|C|916
6FTI|1|u|A|917
6FTI|1|u|G|918
6FTI|1|u|C|919

Current chains

Chain u

28S rRNA

Nearby chains

Chain H

uL6

Chain M

Ribosomal protein L14

Chain S

eL20