IL_6FTI_185
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTI_185 not in the Motif Atlas
- Homologous match to IL_8C3A_484
- Geometric discrepancy: 0.061
- The information below is about IL_8C3A_484
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.2
- Basepair signature
- cWW-cWW-L-cWW-L-R-L-R-L-L
- Number of instances in this motif group
- 3
Unit IDs
6FTI|1|u|G|2847
6FTI|1|u|G|2848
6FTI|1|u|A|2849
6FTI|1|u|A|2850
6FTI|1|u|G|2851
6FTI|1|u|U|2852
6FTI|1|u|C|2853
6FTI|1|u|G|2854
6FTI|1|u|G|2855
*
6FTI|1|u|C|3837
6FTI|1|u|U|3838
6FTI|1|u|G|3839
6FTI|1|u|U|3840
6FTI|1|u|C|3841
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain B
- uL3
- Chain V
- uL14
Coloring options: