IL_6FTJ_035

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GAAGG*CAGCAGCACUC

Length

16 nucleotides

Bulged bases

6FTJ|1|u|G|933, 6FTJ|1|u|C|936

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|G|731
6FTJ|1|u|A|732
6FTJ|1|u|A|733
6FTJ|1|u|G|734
6FTJ|1|u|G|735
*
6FTJ|1|u|C|928
6FTJ|1|u|A|929
6FTJ|1|u|G|930
6FTJ|1|u|C|931
6FTJ|1|u|A|932
6FTJ|1|u|G|933
6FTJ|1|u|C|934
6FTJ|1|u|A|935
6FTJ|1|u|C|936
6FTJ|1|u|U|937
6FTJ|1|u|C|938

Current chains

Chain u

28S rRNA

Nearby chains

Chain C

Ribosomal protein L4

Chain M

Ribosomal protein L14

Chain S

eL20