IL_6FTJ_083
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CCG*CG
- Length
- 5 nucleotides
- Bulged bases
- 6FTJ|1|u|C|2084
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTJ_083 not in the Motif Atlas
- Geometric match to IL_3DIL_001
- Geometric discrepancy: 0.3742
- The information below is about IL_3DIL_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
6FTJ|1|u|C|2083
6FTJ|1|u|C|2084
6FTJ|1|u|G|2085
*
6FTJ|1|u|C|2272
6FTJ|1|u|G|2273
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain F
- Ul30
- Chain Q
- uL14
- Chain e
- eL32
Coloring options: