IL_6FTJ_155
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GCCUCGGAUAGC*GUGCGGAGUGC
- Length
- 23 nucleotides
- Bulged bases
- 6FTJ|1|u|C|4756, 6FTJ|1|u|C|4757, 6FTJ|1|u|U|4763, 6FTJ|1|u|C|4871, 6FTJ|1|u|G|4872, 6FTJ|1|u|A|4874, 6FTJ|1|u|G|4877
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTJ|1|u|G|4755
6FTJ|1|u|C|4756
6FTJ|1|u|C|4757
6FTJ|1|u|U|4758
6FTJ|1|u|C|4759
6FTJ|1|u|G|4760
6FTJ|1|u|G|4761
6FTJ|1|u|A|4762
6FTJ|1|u|U|4763
6FTJ|1|u|A|4764
6FTJ|1|u|G|4765
6FTJ|1|u|C|4766
*
6FTJ|1|u|G|4868
6FTJ|1|u|U|4869
6FTJ|1|u|G|4870
6FTJ|1|u|C|4871
6FTJ|1|u|G|4872
6FTJ|1|u|G|4873
6FTJ|1|u|A|4874
6FTJ|1|u|G|4875
6FTJ|1|u|U|4876
6FTJ|1|u|G|4877
6FTJ|1|u|C|4878
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain H
- uL6
- Chain M
- Ribosomal protein L14
- Chain O
- uL13
- Chain S
- eL20
Coloring options: