IL_6FTJ_179

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGCUGGG*CGCC

Length

11 nucleotides

Bulged bases

6FTJ|1|u|U|728, 6FTJ|1|u|G|729

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|G|725
6FTJ|1|u|G|726
6FTJ|1|u|C|727
6FTJ|1|u|U|728
6FTJ|1|u|G|729
6FTJ|1|u|G|730
6FTJ|1|u|G|731
*
6FTJ|1|u|C|938
6FTJ|1|u|G|939
6FTJ|1|u|C|940
6FTJ|1|u|C|941

Current chains

Chain u

28S rRNA

Nearby chains

Chain C

Ribosomal protein L4

Chain F

Ul30

Chain M

Ribosomal protein L14

Chain S

eL20