IL_6FTJ_180

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|G|745
6FTJ|1|u|A|746
6FTJ|1|u|A|747
6FTJ|1|u|G|748
6FTJ|1|u|G|749
6FTJ|1|u|U|750
6FTJ|1|u|G|751
6FTJ|1|u|G|752
*
6FTJ|1|u|U|911
6FTJ|1|u|G|912
6FTJ|1|u|U|913
6FTJ|1|u|U|914
6FTJ|1|u|A|915
6FTJ|1|u|C|916
6FTJ|1|u|A|917
6FTJ|1|u|G|918
6FTJ|1|u|C|919

Current chains

Chain u

28S rRNA

Nearby chains

Chain M

Ribosomal protein L14

Chain S

eL20