IL_6FTJ_183
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCG*CCCCCGGAGCCCCGCGGACGCUACG
- Length
- 67 nucleotides
- Bulged bases
- 6FTJ|1|u|G|2094, 6FTJ|1|u|G|2111, 6FTJ|1|u|G|2114, 6FTJ|1|u|G|2115, 6FTJ|1|u|C|2116, 6FTJ|1|u|G|2117, 6FTJ|1|u|G|2118, 6FTJ|1|u|C|2119, 6FTJ|1|u|G|2122, 6FTJ|1|u|C|2123, 6FTJ|1|u|G|2124, 6FTJ|1|u|C|2247, 6FTJ|1|u|C|2256, 6FTJ|1|u|G|2259, 6FTJ|1|u|C|2266, 6FTJ|1|u|U|2267, 6FTJ|1|u|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTJ|1|u|C|2087
6FTJ|1|u|A|2088
6FTJ|1|u|G|2089
6FTJ|1|u|U|2090
6FTJ|1|u|C|2091
6FTJ|1|u|G|2092
6FTJ|1|u|A|2093
6FTJ|1|u|G|2094
6FTJ|1|u|A|2095
6FTJ|1|u|G|2096
6FTJ|1|u|U|2097
6FTJ|1|u|G|2098
6FTJ|1|u|G|2099
6FTJ|1|u|A|2100
6FTJ|1|u|C|2101
6FTJ|1|u|G|2102
6FTJ|1|u|G|2103
6FTJ|1|u|G|2104
6FTJ|1|u|A|2105
6FTJ|1|u|G|2106
6FTJ|1|u|C|2107
6FTJ|1|u|G|2108
6FTJ|1|u|G|2109
6FTJ|1|u|C|2110
6FTJ|1|u|G|2111
6FTJ|1|u|G|2112
6FTJ|1|u|G|2113
6FTJ|1|u|G|2114
6FTJ|1|u|G|2115
6FTJ|1|u|C|2116
6FTJ|1|u|G|2117
6FTJ|1|u|G|2118
6FTJ|1|u|C|2119
6FTJ|1|u|G|2120
6FTJ|1|u|C|2121
6FTJ|1|u|G|2122
6FTJ|1|u|C|2123
6FTJ|1|u|G|2124
6FTJ|1|u|C|2125
6FTJ|1|u|G|2126
6FTJ|1|u|C|2127
6FTJ|1|u|G|2128
*
6FTJ|1|u|C|2246
6FTJ|1|u|C|2247
6FTJ|1|u|C|2248
6FTJ|1|u|C|2249
6FTJ|1|u|C|2250
6FTJ|1|u|G|2251
6FTJ|1|u|G|2252
6FTJ|1|u|A|2253
6FTJ|1|u|G|2254
6FTJ|1|u|C|2255
6FTJ|1|u|C|2256
6FTJ|1|u|C|2257
6FTJ|1|u|C|2258
6FTJ|1|u|G|2259
6FTJ|1|u|C|2260
6FTJ|1|u|G|2261
6FTJ|1|u|G|2262
6FTJ|1|u|A|2263
6FTJ|1|u|C|2264
6FTJ|1|u|G|2265
6FTJ|1|u|C|2266
6FTJ|1|u|U|2267
6FTJ|1|u|A|2268
6FTJ|1|u|C|2269
6FTJ|1|u|G|2270
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- Ul30
- Chain Q
- uL14
- Chain r
- eL28
Coloring options: