IL_6FTJ_185

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|C|4466
6FTJ|1|u|A|4467
6FTJ|1|u|U|4468
6FTJ|1|u|U|4469
6FTJ|1|u|G|4470
*
6FTJ|1|u|C|4485
6FTJ|1|u|C|4486
6FTJ|1|u|A|4487
6FTJ|1|u|A|4488
6FTJ|1|u|G|4489
6FTJ|1|u|C|4490
6FTJ|1|u|G|4491

Current chains

Chain u

28S rRNA

Nearby chains

Chain B

uL3

Chain H

uL6

Chain O

uL13

Chain V

uL14

Chain m

eL40