IL_6G18_029

3D structure

PDB id

6G18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUACAG*CCUGUAAU

Length

14 nucleotides

Bulged bases

6G18|1|2|A|555

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6G18|1|2|A|529
6G18|1|2|U|530
6G18|1|2|A|531
6G18|1|2|C|532
6G18|1|2|A|533
6G18|1|2|G|534
*
6G18|1|2|C|549
6G18|1|2|C|550
6G18|1|2|U|551
6G18|1|2|G|552
6G18|1|2|U|553
6G18|1|2|A|554
6G18|1|2|A|555
6G18|1|2|U|556

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain J

40S ribosomal protein S9

Chain e

40S ribosomal protein S30

Chain w

Bystin