IL_6G18_095

3D structure

PDB id

6G18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGACAGGAUUG*CUCGAUUCC

Length

20 nucleotides

Bulged bases

6G18|1|2|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6G18|1|2|G|1280
6G18|1|2|G|1281
6G18|1|2|A|1282
6G18|1|2|C|1283
6G18|1|2|A|1284
6G18|1|2|G|1285
6G18|1|2|G|1286
6G18|1|2|A|1287
6G18|1|2|U|1288
6G18|1|2|U|1289
6G18|1|2|G|1290
*
6G18|1|2|C|1309
6G18|1|2|U|1310
6G18|1|2|C|1311
6G18|1|2|G|1312
6G18|1|2|A|1313
6G18|1|2|U|1314
6G18|1|2|U|1315
6G18|1|2|C|1316
6G18|1|2|C|1317

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain M

40S ribosomal protein S12

Chain f

Ubiquitin-40S ribosomal protein S27a

Chain w

Bystin