IL_6G5H_077

3D structure

PDB id

6G5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUC*GUAACC

Length

9 nucleotides

Bulged bases

6G5H|1|2|A|1580, 6G5H|1|2|C|1581

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6G5H|1|2|G|1550
6G5H|1|2|U|1551
6G5H|1|2|C|1558
*
6G5H|1|2|G|1577
6G5H|1|2|U|1578
6G5H|1|2|A|1579
6G5H|1|2|A|1580
6G5H|1|2|C|1581
6G5H|1|2|C|1582

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D

40S ribosomal protein S3

Chain T

40S ribosomal protein S19

Chain U

40S ribosomal protein S20

Chain d

40S ribosomal protein S29