IL_6G5H_094

3D structure

PDB id

6G5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6G5H|1|2|G|807
6G5H|1|2|A|808
6G5H|1|2|A|809
6G5H|1|2|A|810
6G5H|1|2|A|811
6G5H|1|2|A|812
6G5H|1|2|A|813
6G5H|1|2|U|814
6G5H|1|2|U|815
6G5H|1|2|A|816
*
6G5H|1|2|U|848
6G5H|1|2|A|849
6G5H|1|2|C|850
6G5H|1|2|C|851
6G5H|1|2|G|852
6G5H|1|2|C|853
6G5H|1|2|A|854
6G5H|1|2|G|855
6G5H|1|2|C|856

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain J

40S ribosomal protein S9

Chain L

40S ribosomal protein S11

Chain W

40S ribosomal protein S15a