IL_6G5H_096

3D structure

PDB id

6G5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAGGAUUG*CUCGAUU

Length

16 nucleotides

Bulged bases

6G5H|1|2|G|1285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6G5H|1|2|A|1282
6G5H|1|2|C|1283
6G5H|1|2|A|1284
6G5H|1|2|G|1285
6G5H|1|2|G|1286
6G5H|1|2|A|1287
6G5H|1|2|U|1288
6G5H|1|2|U|1289
6G5H|1|2|G|1290
*
6G5H|1|2|C|1309
6G5H|1|2|U|1310
6G5H|1|2|C|1311
6G5H|1|2|G|1312
6G5H|1|2|A|1313
6G5H|1|2|U|1314
6G5H|1|2|U|1315

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain K

40S ribosomal protein S10

Chain M

40S ribosomal protein S12

Chain d

40S ribosomal protein S29

Chain f

Ribosomal protein S27a