IL_6G5I_080

3D structure

PDB id

6G5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State R

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCCCG*CGUAAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6G5I|1|2|G|1702
6G5I|1|2|C|1703
6G5I|1|2|C|1704
6G5I|1|2|C|1705
6G5I|1|2|G|1706
*
6G5I|1|2|C|1828
6G5I|1|2|G|1829
6G5I|1|2|U|1830
6G5I|1|2|A|1831
6G5I|1|2|A|1832
6G5I|1|2|C|1833

Current chains

Chain 2

18S ribosomal RNA

Nearby chains