IL_6GAW_042

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAG*CACAACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|AA|G|867
6GAW|1|AA|U|868
6GAW|1|AA|A|869
6GAW|1|AA|G|870
*
6GAW|1|AA|C|897
6GAW|1|AA|A|898
6GAW|1|AA|C|899
6GAW|1|AA|A|900
6GAW|1|AA|A|901
6GAW|1|AA|C|902
6GAW|1|AA|C|903

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain Aj

28S ribosomal protein S34, mitochondrial

Chain An

Aurora kinase A interacting protein 1

Chain BC

Translation initiation factor IF-2, mitochondrial

Chain BO

uL14m

Chain BT

Mitochondrial ribosomal protein L19