IL_6GAW_043

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAAAA*UCAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|AA|U|874
6GAW|1|AA|A|875
6GAW|1|AA|A|876
6GAW|1|AA|A|877
6GAW|1|AA|A|878
*
6GAW|1|AA|U|890
6GAW|1|AA|C|891
6GAW|1|AA|A|892
6GAW|1|AA|A|893

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain AO

Uncharacterized protein

Chain Ae

mS27

Chain Aj

28S ribosomal protein S34, mitochondrial