IL_6GAW_048
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CU*ACG
- Length
- 5 nucleotides
- Bulged bases
- 6GAW|1|BA|C|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GAW_048 not in the Motif Atlas
- Homologous match to IL_7A0S_002
- Geometric discrepancy: 0.0918
- The information below is about IL_7A0S_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 175
Unit IDs
6GAW|1|BA|C|12
6GAW|1|BA|U|13
*
6GAW|1|BA|A|103
6GAW|1|BA|C|104
6GAW|1|BA|G|105
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain B1
- Mitochondrial ribosomal protein L28
- Chain B2
- Mitochondrial ribosomal protein L47
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BU
- Mitochondrial ribosomal protein L20
- Chain Bh
- 39S ribosomal protein L44, mitochondrial
- Chain Bn
- Mitochondrial ribosomal protein L51
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